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WormBase Tree Display for Variation: WBVar01545805

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Name Class

WBVar01545805NamePublic_nameWBVar01545805
Other_namecewivar00119840
Y71G12B.11a.1:c.2908-52C>T
Y71G12B.11d.1:c.-271C>T
Y71G12B.11c.1:c.919-52C>T
Y71G12B.11b.1:c.*213-52C>T
Y71G12B.11e.1:c.1813-52C>T
HGVSgCHROMOSOME_I:g.1733245C>T
Sequence_detailsSMapS_parentSequenceY71G12B
Flanking_sequencesGTTGAACTAACAAATTAAACCCCCCCCCCCCTCTTTTTTTATGATAATGTAGTTATTTTA
Mapping_targetY71G12B
Source_location225CHROMOSOME_I17332471733247From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004599From_analysisMillion_mutation_project_reanalysis
WBStrain00022878From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00006771
TranscriptY71G12B.11c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71G12B.11c.1:c.919-52C>T
Intron_number3/6
Y71G12B.11e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71G12B.11e.1:c.1813-52C>T
Intron_number3/6
Y71G12B.11a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71G12B.11a.1:c.2908-52C>T
Intron_number7/11
Y71G12B.11d.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScY71G12B.11d.1:c.-271C>T
cDNA_position14
Exon_number1/6
Y71G12B.11b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71G12B.11b.1:c.*213-52C>T
Intron_number9/12
MethodWGS_Flibotte