Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar01541290

expand all nodes | collapse all nodes | view schema

Name Class

WBVar01541290NamePublic_nameWBVar01541290
Other_namecewivar00104686
Y55D5A.5c.1:c.2771+501T>C
Y55D5A.5f.1:c.341+501T>C
Y55D5A.5e.1:c.2543+501T>C
Y55D5A.5a.1:c.2771+501T>C
Y55D5A.5d.1:c.2630+501T>C
HGVSgCHROMOSOME_III:g.3008109A>G
Sequence_detailsSMapS_parentSequenceY55D5A
Flanking_sequencesTTTCCCATCCAAAAAAGCACATTCATATATTAAAAAGTGATAGGGACTGGGAGAGAGAAG
Mapping_targetY55D5A
Source_location225CHROMOSOME_III30081013008101From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000034From_analysisMillion_mutation_project_reanalysis
WBStrain00004599From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000898
TranscriptY55D5A.5e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5e.1:c.2543+501T>C
Intron_number9/14
Y55D5A.5f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5f.1:c.341+501T>C
Intron_number2/7
Y55D5A.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5a.1:c.2771+501T>C
Intron_number12/18
Y55D5A.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5c.1:c.2771+501T>C
Intron_number13/20
Y55D5A.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5d.1:c.2630+501T>C
Intron_number10/15
MethodWGS_Flibotte