WormBase Tree Display for Variation: WBVar01538396
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WBVar01538396 | Name | Public_name | WBVar01538396 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00093286 | |||||||
CE43402:p.Cys169= | ||||||||
C06C3.4.1:c.507T>C | ||||||||
HGVSg | CHROMOSOME_II:g.9374602T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | C06C3 | ||||
Flanking_sequences | AGTGGATCTTCTTTGGAAAACTGAGATATG | CCATTTTCTTCCACTGATTTTCCAGTTATC | ||||||
Mapping_target | C06C3 | |||||||
Source_location | 225 | CHROMOSOME_II | 9374543 | 9374543 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00007375 | ||||||
Transcript | C06C3.4.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | C06C3.4.1:c.507T>C | |||||||
HGVSp | CE43402:p.Cys169= | |||||||
cDNA_position | 813 | |||||||
CDS_position | 507 | |||||||
Protein_position | 169 | |||||||
Exon_number | 6/8 | |||||||
Codon_change | tgT/tgC | |||||||
Amino_acid_change | C | |||||||
Method | WGS_Flibotte |