WormBase Tree Display for Variation: WBVar01538188
expand all nodes | collapse all nodes | view schema
WBVar01538188 | Name | Public_name | WBVar01538188 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00090496 | |||||||
CE46787:p.Pro239= | ||||||||
C17C3.10.1:c.717C>A | ||||||||
HGVSg | CHROMOSOME_II:g.5539390G>T | |||||||
Sequence_details | SMap | S_parent | Sequence | C17C3 | ||||
Flanking_sequences | GATTTGAAGTGATGGAAGAATGAATCGGAG | GGAGCAGAAAATATTGATGGAACGGTGTTG | ||||||
Mapping_target | C17C3 | |||||||
Source_location | 225 | CHROMOSOME_II | 5539373 | 5539373 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (28) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00001966 | ||||||
Transcript | C17C3.10.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | C17C3.10.1:c.717C>A | |||||||
HGVSp | CE46787:p.Pro239= | |||||||
cDNA_position | 721 | |||||||
CDS_position | 717 | |||||||
Protein_position | 239 | |||||||
Exon_number | 4/5 | |||||||
Codon_change | ccC/ccA | |||||||
Amino_acid_change | P | |||||||
Method | WGS_Flibotte |