WormBase Tree Display for Variation: WBVar01533043
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WBVar01533043 | Name | Public_name | WBVar01533043 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00077830 | |||||||
T07D3.9a.2:c.234T>G | ||||||||
T07D3.9a.1:c.234T>G | ||||||||
CE51163:p.Ser33= | ||||||||
CE32064:p.Ser78= | ||||||||
T07D3.9b.1:c.99T>G | ||||||||
HGVSg | CHROMOSOME_II:g.900446A>C | |||||||
Sequence_details | SMap | S_parent | Sequence | T07D3 | ||||
Flanking_sequences | CGAGCTTCTACTTACCTTCCGATAACTGTG | GAAATGGTCCGTGGCTCCAGCTTCTTGCTA | ||||||
Mapping_target | T07D3 | |||||||
Source_location | 225 | CHROMOSOME_II | 900453 | 900453 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00020311 | ||||||
Transcript | T07D3.9a.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | T07D3.9a.1:c.234T>G | |||||||
HGVSp | CE32064:p.Ser78= | |||||||
cDNA_position | 241 | |||||||
CDS_position | 234 | |||||||
Protein_position | 78 | |||||||
Exon_number | 3/9 | |||||||
Codon_change | tcT/tcG | |||||||
Amino_acid_change | S | |||||||
T07D3.9b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | T07D3.9b.1:c.99T>G | |||||||
HGVSp | CE51163:p.Ser33= | |||||||
cDNA_position | 251 | |||||||
CDS_position | 99 | |||||||
Protein_position | 33 | |||||||
Exon_number | 3/8 | |||||||
Codon_change | tcT/tcG | |||||||
Amino_acid_change | S | |||||||
T07D3.9a.2 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | T07D3.9a.2:c.234T>G | |||||||
HGVSp | CE32064:p.Ser78= | |||||||
cDNA_position | 287 | |||||||
CDS_position | 234 | |||||||
Protein_position | 78 | |||||||
Exon_number | 4/10 | |||||||
Codon_change | tcT/tcG | |||||||
Amino_acid_change | S | |||||||
Method | WGS_Flibotte |