WormBase Tree Display for Variation: WBVar01533022
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WBVar01533022 | Name | Public_name | WBVar01533022 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00077793 | |||||||
CE32064:p.Leu412= | ||||||||
T07D3.9b.1:c.1101C>T | ||||||||
T07D3.9a.1:c.1236C>T | ||||||||
T07D3.9a.2:c.1236C>T | ||||||||
CE51163:p.Leu367= | ||||||||
HGVSg | CHROMOSOME_II:g.898286G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | T07D3 | ||||
Flanking_sequences | GGTGTGCACATAGTGCTTTGGAACCACACG | AGCACATTCGGATTCTCGACGCTTTCCATC | ||||||
Mapping_target | T07D3 | |||||||
Source_location | 225 | CHROMOSOME_II | 898293 | 898293 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00020311 | ||||||
Transcript | T07D3.9a.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | T07D3.9a.1:c.1236C>T | |||||||
HGVSp | CE32064:p.Leu412= | |||||||
cDNA_position | 1243 | |||||||
CDS_position | 1236 | |||||||
Protein_position | 412 | |||||||
Exon_number | 8/9 | |||||||
Codon_change | ctC/ctT | |||||||
Amino_acid_change | L | |||||||
T07D3.9b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | T07D3.9b.1:c.1101C>T | |||||||
HGVSp | CE51163:p.Leu367= | |||||||
cDNA_position | 1253 | |||||||
CDS_position | 1101 | |||||||
Protein_position | 367 | |||||||
Exon_number | 8/8 | |||||||
Codon_change | ctC/ctT | |||||||
Amino_acid_change | L | |||||||
T07D3.9a.2 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | T07D3.9a.2:c.1236C>T | |||||||
HGVSp | CE32064:p.Leu412= | |||||||
cDNA_position | 1289 | |||||||
CDS_position | 1236 | |||||||
Protein_position | 412 | |||||||
Exon_number | 9/10 | |||||||
Codon_change | ctC/ctT | |||||||
Amino_acid_change | L | |||||||
Method | WGS_Flibotte |