WormBase Tree Display for Variation: WBVar01530825
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WBVar01530825 | Name | Public_name | WBVar01530825 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00069653 | |||||||
Y71G12B.11d.1:c.-268C>T | ||||||||
Y71G12B.11e.1:c.1813-49C>T | ||||||||
Y71G12B.11c.1:c.919-49C>T | ||||||||
Y71G12B.11a.1:c.2908-49C>T | ||||||||
Y71G12B.11b.1:c.*213-49C>T | ||||||||
HGVSg | CHROMOSOME_I:g.1733248C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y71G12B | ||||
Flanking_sequences | GAACTAACAAATTAAACCCCCCCCCCCCCT | TTTTTTTATGATAATGTAGTTATTTTAATA | ||||||
Mapping_target | Y71G12B | |||||||
Source_location | 225 | CHROMOSOME_I | 1733250 | 1733250 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (31) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006771 | ||||||
Transcript | Y71G12B.11c.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y71G12B.11c.1:c.919-49C>T | |||||||
Intron_number | 3/6 | |||||||
Y71G12B.11e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y71G12B.11e.1:c.1813-49C>T | |||||||
Intron_number | 3/6 | |||||||
Y71G12B.11a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y71G12B.11a.1:c.2908-49C>T | |||||||
Intron_number | 7/11 | |||||||
Y71G12B.11d.1 | VEP_consequence | 5_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y71G12B.11d.1:c.-268C>T | |||||||
cDNA_position | 17 | |||||||
Exon_number | 1/6 | |||||||
Y71G12B.11b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y71G12B.11b.1:c.*213-49C>T | |||||||
Intron_number | 9/12 | |||||||
Method | WGS_Flibotte |