WormBase Tree Display for Variation: WBVar01503680
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WBVar01503680 | Name | Public_name | WBVar01503680 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00006941 | |||||||
CE37163:p.Glu890= | ||||||||
Y110A2AL.8b.1:c.2679G>A | ||||||||
Y110A2AL.8c.1:c.2697G>A | ||||||||
CE42182:p.Glu899= | ||||||||
CE37164:p.Glu893= | ||||||||
Y110A2AL.8a.1:c.2670G>A | ||||||||
HGVSg | CHROMOSOME_II:g.2847621C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y110A2AL | ||||
Flanking_sequences | AGCACGAAGGAAGGCCGCTGGTGGGGTGTG | TCTGGAAGCACGTCGGCGAGCTCGAGACCG | ||||||
Mapping_target | Y110A2AL | |||||||
Source_location | 225 | CHROMOSOME_II | 2847626 | 2847626 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00004210 | ||||||
Transcript | Y110A2AL.8b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y110A2AL.8b.1:c.2679G>A | |||||||
HGVSp | CE37164:p.Glu893= | |||||||
cDNA_position | 2760 | |||||||
CDS_position | 2679 | |||||||
Protein_position | 893 | |||||||
Exon_number | 11/15 | |||||||
Codon_change | gaG/gaA | |||||||
Amino_acid_change | E | |||||||
Y110A2AL.8a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y110A2AL.8a.1:c.2670G>A | |||||||
HGVSp | CE37163:p.Glu890= | |||||||
cDNA_position | 2751 | |||||||
CDS_position | 2670 | |||||||
Protein_position | 890 | |||||||
Exon_number | 11/15 | |||||||
Codon_change | gaG/gaA | |||||||
Amino_acid_change | E | |||||||
Y110A2AL.8c.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y110A2AL.8c.1:c.2697G>A | |||||||
HGVSp | CE42182:p.Glu899= | |||||||
cDNA_position | 2697 | |||||||
CDS_position | 2697 | |||||||
Protein_position | 899 | |||||||
Exon_number | 10/13 | |||||||
Codon_change | gaG/gaA | |||||||
Amino_acid_change | E | |||||||
Method | WGS_Flibotte |