WormBase Tree Display for Variation: WBVar01474433

WBVar01474433 Name: Public_name: tm6411
    HGVSg: CHROMOSOME_I:g.1157087_1157540del
  Sequence_details: SMap: S_parent: Sequence: Y48G8AL
    Flanking_sequences: tccgcagaagaacataccgtgcccacggaa ctagtaatttttaatagaaatattaaacag
    Mapping_target: Y48G8AL
    Source_location: 7 CHROMOSOME_I 1157086 1157541 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm6411_external
      tm6411_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 6411
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00004429
    Transcript: Y48G8AL.8.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: 428-?
        CDS_position: 410-?
        Protein_position: 137-?
        Intron_number: 3/4
        Exon_number: 3-5/5
  Isolation: Mutagen: TMP/UV
  Genetics: Map: I
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal or sterile by the National BioResource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal or sterile by the National BioResource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 24578/24579-25032/25033 (454 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele