WormBase Tree Display for Variation: WBVar01473862

WBVar01473862 Name: Public_name: tm6129
    Other_name: C14C10.5b.1:c.-26_215delinsT
      C14C10.5a.1:c.-26_263delinsT
    HGVSg: CHROMOSOME_V:g.12600260_12600679delinsT
  Sequence_details: SMap: S_parent: Sequence: C14C10
    Flanking_sequences: tgcagttattttattttattatttactgta acttgaagaacaagccaatcagcacttttt
    Mapping_target: C14C10
    Source_location: 7 CHROMOSOME_V 12600259 12600680 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: T
      Deletion
    PCR_product: tm6129_external
      tm6129_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 6129
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00007588
    Transcript: C14C10.5b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,start_lost,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C14C10.5b.1:c.-26_215delinsT
        cDNA_position: 69-309
        CDS_position: ?-215
        Protein_position: ?-72
        Intron_number: 2-3/10
        Exon_number: 1-4/11
      C14C10.5a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,start_lost,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C14C10.5a.1:c.-26_263delinsT
        cDNA_position: 69-357
        CDS_position: ?-263
        Protein_position: ?-88
        Intron_number: 2/9
        Exon_number: 1-3/10
  Isolation: Mutagen: TMP/UV
  Genetics: Map: V
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 12166/12167-T-12586/12587 (420 bp deletion + 1 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele