WormBase Tree Display for Variation: WBVar01472659
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WBVar01472659 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01472659 | ||||
Other_name | C05G5.2b.1:c.1581+4A>G | |||||
C05G5.2a.1:c.1581+4A>G | ||||||
HGVSg | CHROMOSOME_X:g.14749734A>G | |||||
Sequence_details | SMap | S_parent | Sequence | C05G5 | ||
Flanking_sequences | GTTCCAAAAGCTGTTGATATTCCAGCGGTA | GTTTTGTTCTAAATACACTGGACAGAGTAT | ||||
Mapping_target | C05G5 | |||||
Type_of_mutation | Substitution | a | g | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (50) | ||||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193357961 | ||
dbSNP_ss | ss | 295533880 | ||||
Status | Live | |||||
Affects | Gene | WBGene00007348 | ||||
Transcript | C05G5.2a.1 | VEP_consequence | splice_region_variant,intron_variant | |||
VEP_impact | LOW | |||||
HGVSc | C05G5.2a.1:c.1581+4A>G | |||||
Intron_number | 8/11 | |||||
C05G5.2b.1 | VEP_consequence | splice_region_variant,intron_variant | ||||
VEP_impact | LOW | |||||
HGVSc | C05G5.2b.1:c.1581+4A>G | |||||
Intron_number | 8/11 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |