WormBase Tree Display for Variation: WBVar01471099
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WBVar01471099 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01471099 | ||||
Other_name | cewivar00613340 | |||||
C34F6.10c.1:c.102-938C>A | ||||||
C34F6.10a.1:c.-16-269C>A | ||||||
C34F6.10d.1:c.-16-269C>A | ||||||
C34F6.10b.1:c.102-938C>A | ||||||
HGVSg | CHROMOSOME_X:g.11237650G>T | |||||
Sequence_details | SMap | S_parent | Sequence | C03A3 | ||
Flanking_sequences | TTAAGCCTCGCATAAAATCGTAGCACATAG | GTTCTAGGAATTGGCGTAGGCACTAAGAAA | ||||
Mapping_target | C03A3 | |||||
Type_of_mutation | Substitution | g | t | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Andersen | ||||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
Million_mutation_project_reanalysis | ||||||
DB_info | Database | dbSNP_rs | rs | 193356401 | ||
dbSNP_ss | ss | 295532320 | ||||
Status | Live | |||||
Affects | Gene | WBGene00007944 | ||||
Transcript | C34F6.10d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | C34F6.10d.1:c.-16-269C>A | |||||
Intron_number | 1/16 | |||||
C34F6.10c.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | C34F6.10c.1:c.102-938C>A | |||||
Intron_number | 2/15 | |||||
C34F6.10b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | C34F6.10b.1:c.102-938C>A | |||||
Intron_number | 2/16 | |||||
C34F6.10a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | C34F6.10a.1:c.-16-269C>A | |||||
Intron_number | 1/17 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |