WormBase Tree Display for Variation: WBVar01471092
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WBVar01471092 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01471092 | ||||
Other_name | cewivar00382384 | |||||
C34F6.10c.1:c.*557G>A | ||||||
C34F6.10a.2:c.*557G>A | ||||||
C34F6.10d.2:c.*557G>A | ||||||
C34F6.10d.1:c.*557G>A | ||||||
C34F6.10b.1:c.*557G>A | ||||||
C34F6.10a.1:c.*557G>A | ||||||
HGVSg | CHROMOSOME_X:g.11229250C>T | |||||
Sequence_details | SMap | S_parent | Sequence | C34F6 | ||
Flanking_sequences | TCCAAATATATACATTCATTGCTAAATGGA | ACAAGTATAAAGGGGAAATATTAAATTAAT | ||||
Mapping_target | C34F6 | |||||
Type_of_mutation | Substitution | c | t | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (22) | ||||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | ||||||
DB_info | Database | dbSNP_rs | rs | 193356394 | ||
dbSNP_ss | ss | 295532313 | ||||
Status | Live | |||||
Affects | Gene | WBGene00007944 | ||||
Transcript | C34F6.10a.2 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | C34F6.10a.2:c.*557G>A | |||||
cDNA_position | 4973 | |||||
Exon_number | 17/17 | |||||
C34F6.10d.1 | VEP_consequence | 3_prime_UTR_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | C34F6.10d.1:c.*557G>A | |||||
cDNA_position | 5017 | |||||
Exon_number | 17/17 | |||||
C34F6.10c.1 | VEP_consequence | 3_prime_UTR_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | C34F6.10c.1:c.*557G>A | |||||
cDNA_position | 4917 | |||||
Exon_number | 16/16 | |||||
C34F6.10b.1 | VEP_consequence | 3_prime_UTR_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | C34F6.10b.1:c.*557G>A | |||||
cDNA_position | 4998 | |||||
Exon_number | 17/17 | |||||
C34F6.10d.2 | VEP_consequence | 3_prime_UTR_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | C34F6.10d.2:c.*557G>A | |||||
cDNA_position | 4901 | |||||
Exon_number | 16/16 | |||||
C34F6.10a.1 | VEP_consequence | 3_prime_UTR_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | C34F6.10a.1:c.*557G>A | |||||
cDNA_position | 5095 | |||||
Exon_number | 18/18 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |