WormBase Tree Display for Variation: WBVar01470647

WBVar01470647 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar01470647
    Other_name: R07B1.5.2:c.-478T>A
      R07B1.5.3:c.-478T>A
      R07B1.5.1:c.-478T>A
    HGVSg: CHROMOSOME_X:g.9864120T>A
  Sequence_details: SMap: S_parent: Sequence: R07B1
    Flanking_sequences: GATCTCTCAATTTGCTTCTCACCTTATTCT GGTTCATTTGCAATGTCACAGTGTTGCTTA
    Mapping_target: R07B1
    Type_of_mutation: Substitution: t a
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031279 From_analysis: WGS_Andersen
      WBStrain00031284 From_analysis: WGS_Andersen
    Laboratory: QX
    Person: WBPerson1730
    Analysis: WGS_Andersen
    DB_info: Database: dbSNP_rs rs 193355949
        dbSNP_ss ss 295531868
    Status: Live
  Affects: Gene: WBGene00011077
    Transcript: R07B1.5.2 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: R07B1.5.2:c.-478T>A
        cDNA_position: 86
        Exon_number: 1/7
      R07B1.5.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: R07B1.5.1:c.-478T>A
        cDNA_position: 495
        Exon_number: 2/8
      R07B1.5.3 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: R07B1.5.3:c.-478T>A
        cDNA_position: 68
        Exon_number: 1/8
  Reference: WBPaper00040707
  Method: WGS_Andersen