WormBase Tree Display for Variation: WBVar01468272
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WBVar01468272 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01468272 | ||||
Other_name | C04F6.5.1:c.570G>A | |||||
CE45036:p.Trp190Ter | ||||||
HGVSg | CHROMOSOME_X:g.3413873C>T | |||||
Sequence_details | SMap | S_parent | Sequence | C04F6 | ||
Flanking_sequences | CGGGTAAGAACTGAGGTACGGAAGCGGCCT | CAGCCCTGGAAGTATATGATTAGTAAATCT | ||||
Mapping_target | C04F6 | |||||
Type_of_mutation | Substitution | c | t | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (186) | ||||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193353574 | ||
dbSNP_ss | ss | 295529493 | ||||
Status | Live | |||||
Affects | Gene | WBGene00000990 | ||||
Transcript | C04F6.5.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | |||||
HGVSc | C04F6.5.1:c.570G>A | |||||
HGVSp | CE45036:p.Trp190Ter | |||||
cDNA_position | 574 | |||||
CDS_position | 570 | |||||
Protein_position | 190 | |||||
Exon_number | 6/9 | |||||
Codon_change | tgG/tgA | |||||
Amino_acid_change | W/* | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |