WormBase Tree Display for Variation: WBVar01466532
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WBVar01466532 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01466532 | ||||
Other_name | CE24516:p.Glu108= | |||||
Y60A3A.1.1:c.324G>A | ||||||
HGVSg | CHROMOSOME_V:g.20003033C>T | |||||
Sequence_details | SMap | S_parent | Sequence | Y60A3A | ||
Flanking_sequences | AATTTGCACGACAAAATGTTGAATAGTATC | TCATTCAATGTAGTCTTCTGTTGTAAATAA | ||||
Mapping_target | Y60A3A | |||||
Type_of_mutation | Substitution | c | t | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00031279 | From_analysis | WGS_Andersen | |||
WBStrain00031284 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193352046 | ||
dbSNP_ss | ss | 295527965 | ||||
Status | Live | |||||
Affects | Gene | WBGene00006786 | ||||
Transcript | Y60A3A.1.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | Y60A3A.1.1:c.324G>A | |||||
HGVSp | CE24516:p.Glu108= | |||||
cDNA_position | 389 | |||||
CDS_position | 324 | |||||
Protein_position | 108 | |||||
Exon_number | 3/11 | |||||
Codon_change | gaG/gaA | |||||
Amino_acid_change | E | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |