WormBase Tree Display for Variation: WBVar01466432

WBVar01466432 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar01466432
    Other_name: Y60A3A.19a.1:c.357+87G>C
      Y60A3A.19c.1:c.444G>C
      CE42338:p.Arg148=
      Y60A3A.19b.1:c.438+6G>C
    HGVSg: CHROMOSOME_V:g.19918128G>C
  Sequence_details: SMap: S_parent: Sequence: Y60A3A
    Flanking_sequences: TTTATCGCTTTATGGACAATTTGGGGTGCG GGGAATTCATAGAAAAGCTGGGGAAAATTA
    Mapping_target: Y60A3A
    Type_of_mutation: Substitution: g c
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (115)
    Laboratory: QX
    Person: WBPerson1730
    Analysis: WGS_Andersen
    DB_info: Database: dbSNP_rs rs 193351977
        dbSNP_ss ss 295527896
    Status: Live
  Affects: Gene: WBGene00013365
    Transcript: Y60A3A.19c.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y60A3A.19c.1:c.444G>C
        HGVSp: CE42338:p.Arg148=
        cDNA_position: 458
        CDS_position: 444
        Protein_position: 148
        Exon_number: 4/6
        Codon_change: cgG/cgC
        Amino_acid_change: R
      Y60A3A.19b.1 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: Y60A3A.19b.1:c.438+6G>C
        Intron_number: 4/6
      Y60A3A.19a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y60A3A.19a.1:c.357+87G>C
        Intron_number: 4/6
  Reference: WBPaper00040707
  Method: WGS_Andersen