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WormBase Tree Display for Variation: WBVar01466280

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Name Class

WBVar01466280EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar01466280
Other_nameY116F11B.12c.1:c.1359-1082T>A
Y116F11B.12b.1:c.1359-1996T>A
Y116F11B.12a.2:c.1359-1470T>A
Y116F11B.13.1:c.169-314A>T
Y116F11B.12a.1:c.1359-1470T>A
HGVSgCHROMOSOME_V:g.19884517A>T
Sequence_detailsSMapS_parentSequenceY116F11B
Flanking_sequencesGTGGTGTTTGCGGACTTGGCACCTGAGTTGCGGAATAATGCACTAAAGCGTTGAAAAATG
Mapping_targetY116F11B
Type_of_mutationSubstitutionat
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (133)
LaboratoryQX
PersonWBPerson1730
AnalysisWGS_Andersen
DB_infoDatabasedbSNP_rsrs193351877
dbSNP_ssss295527796
StatusLive
AffectsGeneWBGene00001629
WBGene00013828
TranscriptY116F11B.12b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY116F11B.12b.1:c.1359-1996T>A
Intron_number6/7
Y116F11B.12a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY116F11B.12a.2:c.1359-1470T>A
Intron_number7/10
Y116F11B.12a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY116F11B.12a.1:c.1359-1470T>A
Intron_number8/11
Y116F11B.13.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY116F11B.13.1:c.169-314A>T
Intron_number2/3
Y116F11B.12c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY116F11B.12c.1:c.1359-1082T>A
Intron_number6/6
ReferenceWBPaper00040707
MethodWGS_Andersen