WormBase Tree Display for Variation: WBVar01465856
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WBVar01465856 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01465856 | ||||
Other_name | cewivar00590505 | |||||
Y39B6A.13.1:c.123G>A | ||||||
CE21694:p.Arg41= | ||||||
HGVSg | CHROMOSOME_V:g.19119195C>T | |||||
Sequence_details | SMap | S_parent | Sequence | Y39B6A | ||
Flanking_sequences | AAGTTTTTGCATCGAAATCTTCACAATCAA | CGGAAAACGCGCTCTTTTTCATCGCCGCTT | ||||
Mapping_target | Y39B6A | |||||
Type_of_mutation | Substitution | c | t | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00006697 | From_analysis | WGS_Andersen | |||
WBStrain00006698 | From_analysis | WGS_Andersen | ||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||
WGS_Andersen | ||||||
WBStrain00023079 | From_analysis | WGS_Andersen | ||||
WBStrain00023084 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | ||||||
DB_info | Database | dbSNP_rs | rs | 193351512 | ||
dbSNP_ss | ss | 295527431 | ||||
Status | Live | |||||
Affects | Gene | WBGene00012675 | ||||
Transcript | Y39B6A.13.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | Y39B6A.13.1:c.123G>A | |||||
HGVSp | CE21694:p.Arg41= | |||||
cDNA_position | 188 | |||||
CDS_position | 123 | |||||
Protein_position | 41 | |||||
Exon_number | 3/7 | |||||
Codon_change | cgG/cgA | |||||
Amino_acid_change | R | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |