WormBase Tree Display for Variation: WBVar01465811
expand all nodes | collapse all nodes | view schema
WBVar01465811 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01465811 | ||||
Other_name | cewivar00050171 | |||||
Y39B6A.19b.1:c.534+522G>A | ||||||
Y39B6A.19a.1:c.561+522G>A | ||||||
HGVSg | CHROMOSOME_V:g.19064201G>A | |||||
Sequence_details | SMap | S_parent | Sequence | Y39B6A | ||
Flanking_sequences | CGACCCTATCCGACACATCGGAACTTGCCGGCGACACGAAAAATTGTGTC | GCGGTGAATTCCGACACTATCCGACACATCGGAACTTGCCGGCGACACGAAAAATTGTGCCGGCGGTAAA | ||||
Mapping_target | Y39B6A | |||||
Type_of_mutation | Substitution | g | a | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (121) | ||||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | ||||||
DB_info | Database | dbSNP_rs | rs | 193351467 | ||
dbSNP_ss | ss | 295527386 | ||||
Status | Live | |||||
Affects | Gene | WBGene00006696 | ||||
Transcript | Y39B6A.19b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | Y39B6A.19b.1:c.534+522G>A | |||||
Intron_number | 4/6 | |||||
Y39B6A.19a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y39B6A.19a.1:c.561+522G>A | |||||
Intron_number | 5/7 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |