WormBase Tree Display for Variation: WBVar01465810
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WBVar01465810 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01465810 | ||||
Other_name | cewivar00050170 | |||||
Y39B6A.19b.1:c.534+520T>C | ||||||
Y39B6A.19a.1:c.561+520T>C | ||||||
HGVSg | CHROMOSOME_V:g.19064199T>C | |||||
Sequence_details | SMap | S_parent | Sequence | Y39B6A | ||
Flanking_sequences | TCCGACCCTATCCGACACATCGGAACTTGCCGGCGACACGAAAAATTGTG | CGGCGGTGAATTCCGACACTATCCGACACATCGGAACTTGCCGGCGACACGAAAAATTGTGCCGGCGGTA | ||||
Mapping_target | Y39B6A | |||||
Type_of_mutation | Substitution | t | c | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (145) | ||||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | ||||||
DB_info | Database | dbSNP_rs | rs | 193351466 | ||
dbSNP_ss | ss | 295527385 | ||||
Status | Live | |||||
Affects | Gene | WBGene00006696 | ||||
Transcript | Y39B6A.19b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | Y39B6A.19b.1:c.534+520T>C | |||||
Intron_number | 4/6 | |||||
Y39B6A.19a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y39B6A.19a.1:c.561+520T>C | |||||
Intron_number | 5/7 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |