WormBase Tree Display for Variation: WBVar01457580
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WBVar01457580 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01457580 | ||||
Other_name | cewivar00381157 | |||||
CE15357:p.Ser110Phe | ||||||
ZK488.4.1:c.329C>T | ||||||
HGVSg | CHROMOSOME_V:g.601074C>T | |||||
Sequence_details | SMap | S_parent | Sequence | ZK488 | ||
Flanking_sequences | CCGGTTCAACCGGATCTACAAGATCATCTT | TCCAGAAACATCTCCAGCTGAACCATCAAA | ||||
Mapping_target | ZK488 | |||||
Type_of_mutation | Substitution | c | t | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (28) | ||||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | ||||||
DB_info | Database | dbSNP_rs | rs | 193343237 | ||
dbSNP_ss | ss | 295519156 | ||||
Status | Live | |||||
Affects | Gene | WBGene00022756 | ||||
Transcript | ZK488.4.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
HGVSc | ZK488.4.1:c.329C>T | |||||
HGVSp | CE15357:p.Ser110Phe | |||||
cDNA_position | 393 | |||||
CDS_position | 329 | |||||
Protein_position | 110 | |||||
Exon_number | 5/10 | |||||
Codon_change | tCt/tTt | |||||
Amino_acid_change | S/F | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |