WormBase Tree Display for Variation: WBVar01457564
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WBVar01457564 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01457564 | ||||
Other_name | cewivar00219697 | |||||
CE50872:p.Thr24= | ||||||
C14C6.4.1:c.72C>T | ||||||
HGVSg | CHROMOSOME_V:g.539671C>T | |||||
Sequence_details | SMap | S_parent | Sequence | C14C6 | ||
Flanking_sequences | CGAAAGAACCAGTTATCATTTTGGGACCAC | ACCTGCATGGCTTGTGCCTCTTTTTTCCGA | ||||
Mapping_target | C14C6 | |||||
Type_of_mutation | Substitution | c | t | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (40) | ||||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | ||||||
DB_info | Database | dbSNP_rs | rs | 193343221 | ||
dbSNP_ss | ss | 295519140 | ||||
Status | Live | |||||
Affects | Gene | WBGene00015758 | ||||
Transcript | C14C6.4.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | C14C6.4.1:c.72C>T | |||||
HGVSp | CE50872:p.Thr24= | |||||
cDNA_position | 72 | |||||
CDS_position | 72 | |||||
Protein_position | 24 | |||||
Exon_number | 2/10 | |||||
Codon_change | acC/acT | |||||
Amino_acid_change | T | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |