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WormBase Tree Display for Variation: WBVar01454957

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Name Class

WBVar01454957EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar01454957
Other_namecewivar00380407
Y62E10A.13a.1:c.39-122T>C
Y62E10A.13c.1:c.-1-122T>C
Y62E10A.13e.1:c.48-122T>C
Y62E10A.13b.1:c.48-122T>C
Y62E10A.13c.2:c.-1-122T>C
HGVSgCHROMOSOME_IV:g.13392723A>G
Sequence_detailsSMapS_parentSequenceY62E10A
Flanking_sequencesCCTCGAGGAGGATTGCACCAGTTTTTGGATAAATCCCTGATTTTGTATAATTTTCGCTGA
Mapping_targetY62E10A
Type_of_mutationSubstitutionag
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (21)
LaboratoryQX
PersonWBPerson1730
AnalysisMillion_mutation_project_reanalysis
WGS_Andersen
DB_infoDatabasedbSNP_rsrs193340614
dbSNP_ssss295516533
StatusLive
AffectsGeneWBGene00013379
TranscriptY62E10A.13e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY62E10A.13e.1:c.48-122T>C
Intron_number1/3
Y62E10A.13c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY62E10A.13c.1:c.-1-122T>C
Intron_number1/5
Y62E10A.13c.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY62E10A.13c.2:c.-1-122T>C
Intron_number1/5
Y62E10A.13a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY62E10A.13a.1:c.39-122T>C
Intron_number2/5
Y62E10A.13b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY62E10A.13b.1:c.48-122T>C
Intron_number2/5
ReferenceWBPaper00040707
MethodWGS_Andersen