WormBase Tree Display for Variation: WBVar01454957
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WBVar01454957 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01454957 | ||||
Other_name | cewivar00380407 | |||||
Y62E10A.13a.1:c.39-122T>C | ||||||
Y62E10A.13c.1:c.-1-122T>C | ||||||
Y62E10A.13e.1:c.48-122T>C | ||||||
Y62E10A.13b.1:c.48-122T>C | ||||||
Y62E10A.13c.2:c.-1-122T>C | ||||||
HGVSg | CHROMOSOME_IV:g.13392723A>G | |||||
Sequence_details | SMap | S_parent | Sequence | Y62E10A | ||
Flanking_sequences | CCTCGAGGAGGATTGCACCAGTTTTTGGAT | AAATCCCTGATTTTGTATAATTTTCGCTGA | ||||
Mapping_target | Y62E10A | |||||
Type_of_mutation | Substitution | a | g | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (21) | ||||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | ||||||
DB_info | Database | dbSNP_rs | rs | 193340614 | ||
dbSNP_ss | ss | 295516533 | ||||
Status | Live | |||||
Affects | Gene | WBGene00013379 | ||||
Transcript | Y62E10A.13e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | Y62E10A.13e.1:c.48-122T>C | |||||
Intron_number | 1/3 | |||||
Y62E10A.13c.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y62E10A.13c.1:c.-1-122T>C | |||||
Intron_number | 1/5 | |||||
Y62E10A.13c.2 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y62E10A.13c.2:c.-1-122T>C | |||||
Intron_number | 1/5 | |||||
Y62E10A.13a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y62E10A.13a.1:c.39-122T>C | |||||
Intron_number | 2/5 | |||||
Y62E10A.13b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y62E10A.13b.1:c.48-122T>C | |||||
Intron_number | 2/5 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |