WormBase Tree Display for Variation: WBVar01454603
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WBVar01454603 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01454603 | ||||
Other_name | cewivar00573235 | |||||
F53B2.7:n.1079+7A>G | ||||||
HGVSg | CHROMOSOME_IV:g.12514978A>G | |||||
Sequence_details | SMap | S_parent | Sequence | F53B2 | ||
Flanking_sequences | CTCCATGACAATAAGTGTGTTGCGGTGAGT | GTTTTGGAAATTAAAAAGTCAAAAGTTAGA | ||||
Mapping_target | F53B2 | |||||
Type_of_mutation | Substitution | a | g | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Andersen | ||||||
WBStrain00023084 | From_analysis | WGS_Andersen | ||||
WBStrain00031279 | From_analysis | WGS_Andersen | ||||
WBStrain00031284 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | ||||||
DB_info | Database | dbSNP_rs | rs | 193340260 | ||
dbSNP_ss | ss | 295516179 | ||||
Status | Live | |||||
Affects | Gene | WBGene00014769 | ||||
Pseudogene | F53B2.7 | VEP_consequence | splice_region_variant,intron_variant,non_coding_transcript_variant | |||
VEP_impact | LOW | |||||
HGVSc | F53B2.7:n.1079+7A>G | |||||
Intron_number | 3/4 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |