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WormBase Tree Display for Variation: WBVar01453224

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Name Class

WBVar01453224EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar01453224
Other_namecewivar00566583
F57H12.4.2:c.-76T>A
F57H12.4.3:c.-76T>A
F57H12.4.4:c.-76T>A
F57H12.4.1:c.-554T>A
HGVSgCHROMOSOME_IV:g.7970585T>A
Sequence_detailsSMapS_parentSequenceF57H12
Flanking_sequencesTGCAGTCCTCTCCGCAATTGTATTTGCTCGCTTCGTCAGAGTTCACTTGAGGTAGACGAA
Mapping_targetF57H12
Type_of_mutationSubstitutionta
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023072From_analysisMillion_mutation_project_reanalysis
WGS_Andersen
WBStrain00023084From_analysisWGS_Andersen
LaboratoryQX
PersonWBPerson1730
AnalysisMillion_mutation_project_reanalysis
WGS_Andersen
DB_infoDatabasedbSNP_rsrs193338881
dbSNP_ssss295514800
StatusLive
AffectsGeneWBGene00019019
TranscriptF57H12.4.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScF57H12.4.1:c.-554T>A
cDNA_position305
Exon_number2/9
F57H12.4.3VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScF57H12.4.3:c.-76T>A
cDNA_position268
Exon_number2/10
F57H12.4.2VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScF57H12.4.2:c.-76T>A
cDNA_position242
Exon_number2/10
F57H12.4.4VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScF57H12.4.4:c.-76T>A
cDNA_position58
Exon_number1/9
ReferenceWBPaper00040707
MethodWGS_Andersen