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WormBase Tree Display for Variation: WBVar01450981

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Name Class

WBVar01450981EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar01450981
Other_namecewivar00379700
F52C12.4e.1:c.2605-77G>A
F52C12.4h.1:c.2650-77G>A
F52C12.4g.1:c.2644-77G>A
F52C12.4a.1:c.2611-77G>A
F52C12.4d.1:c.2656-77G>A
F52C12.4b.1:c.2617-77G>A
F52C12.4c.1:c.2650-77G>A
F52C12.4f.1:c.2611-77G>A
HGVSgCHROMOSOME_IV:g.1940164G>A
Sequence_detailsSMapS_parentSequenceF52C12
Flanking_sequencesCCCAAAGCATGATGCAAGTGCGCTCCAATAAAATTCCCAAATTTCGAGTAATATTCTCAT
Mapping_targetF52C12
Type_of_mutationSubstitutionga
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (27)
LaboratoryQX
PersonWBPerson1730
AnalysisMillion_mutation_project_reanalysis
WGS_Andersen
DB_infoDatabasedbSNP_rsrs193336638
dbSNP_ssss295512557
StatusLive
AffectsGeneWBGene00018681
TranscriptF52C12.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52C12.4d.1:c.2656-77G>A
Intron_number16/21
F52C12.4h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52C12.4h.1:c.2650-77G>A
Intron_number16/21
F52C12.4g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52C12.4g.1:c.2644-77G>A
Intron_number17/23
F52C12.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52C12.4c.1:c.2650-77G>A
Intron_number16/21
F52C12.4f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52C12.4f.1:c.2611-77G>A
Intron_number15/20
F52C12.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52C12.4b.1:c.2617-77G>A
Intron_number16/22
F52C12.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52C12.4a.1:c.2611-77G>A
Intron_number15/21
F52C12.4e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF52C12.4e.1:c.2605-77G>A
Intron_number16/22
ReferenceWBPaper00040707
MethodWGS_Andersen