WormBase Tree Display for Variation: WBVar01450795
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| WBVar01450795 | Evidence | Paper_evidence | WBPaper00040707 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01450795 | ||||
| Other_name | CE48212:p.Leu268= | |||||
| CE52059:p.Leu1232= | ||||||
| Y41D4B.19b.1:c.3696T>G | ||||||
| Y41D4B.19c.1:c.804T>G | ||||||
| HGVSg | CHROMOSOME_IV:g.1569656A>C | |||||
| Sequence_details | SMap | S_parent | Sequence | Y41D4B | ||
| Flanking_sequences | GCAATTGCTTAAATTGATTTTTTTGCACAA | AGCGGATAGAATGATGGCGGAAGGATGTGT | ||||
| Mapping_target | Y41D4B | |||||
| Type_of_mutation | Substitution | a | c | |||
| SeqStatus | Sequenced | |||||
| Variation_type | SNP | |||||
| Natural_variant | ||||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00005835 | From_analysis | WGS_Andersen | |||
| WBStrain00022898 | From_analysis | WGS_Andersen | ||||
| WBStrain00023072 | From_analysis | WGS_Andersen | ||||
| WBStrain00023084 | From_analysis | WGS_Andersen | ||||
| WBStrain00023152 | From_analysis | WGS_Andersen | ||||
| WBStrain00023164 | From_analysis | WGS_Andersen | ||||
| WBStrain00023176 | From_analysis | WGS_Andersen | ||||
| WBStrain00023177 | From_analysis | WGS_Andersen | ||||
| WBStrain00031279 | From_analysis | WGS_Andersen | ||||
| WBStrain00031284 | From_analysis | WGS_Andersen | ||||
| Laboratory | QX | |||||
| Person | WBPerson1730 | |||||
| Analysis | WGS_Andersen | |||||
| DB_info | Database | dbSNP_rs | rs | 193336452 | ||
| dbSNP_ss | ss | 295512371 | ||||
| Status | Live | |||||
| Affects | Gene | WBGene00003794 | ||||
| Transcript | Y41D4B.19c.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | |||||
| HGVSc | Y41D4B.19c.1:c.804T>G | |||||
| HGVSp | CE48212:p.Leu268= | |||||
| cDNA_position | 804 | |||||
| CDS_position | 804 | |||||
| Protein_position | 268 | |||||
| Exon_number | 3/4 | |||||
| Codon_change | ctT/ctG | |||||
| Amino_acid_change | L | |||||
| Y41D4B.19b.1 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | |||||
| HGVSc | Y41D4B.19b.1:c.3696T>G | |||||
| HGVSp | CE52059:p.Leu1232= | |||||
| cDNA_position | 3715 | |||||
| CDS_position | 3696 | |||||
| Protein_position | 1232 | |||||
| Exon_number | 13/15 | |||||
| Codon_change | ctT/ctG | |||||
| Amino_acid_change | L | |||||
| Reference | WBPaper00040707 | |||||
| Method | WGS_Andersen |
