WormBase Tree Display for Variation: WBVar01449883
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WBVar01449883 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01449883 | ||||
Other_name | F45G2.9.1:c.-15T>C | |||||
HGVSg | CHROMOSOME_III:g.13436927A>G | |||||
Sequence_details | SMap | S_parent | Sequence | F45G2 | ||
Flanking_sequences | TTTTCGTTGAGAACATCCTGACACTTTTGA | CATTTTTTTTCGAATTCTTAATCACTAATT | ||||
Mapping_target | F45G2 | |||||
Type_of_mutation | Substitution | a | g | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023180 | From_analysis | WGS_Andersen | |||
WBStrain00023279 | From_analysis | WGS_Andersen | ||||
WBStrain00023286 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193335578 | ||
dbSNP_ss | ss | 295511497 | ||||
Status | Live | |||||
Affects | Gene | WBGene00009735 | ||||
Transcript | F45G2.9.1 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | F45G2.9.1:c.-15T>C | |||||
cDNA_position | 17 | |||||
Exon_number | 1/6 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |