WormBase Tree Display for Variation: WBVar01447847
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WBVar01447847 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01447847 | ||||
Other_name | T16G12.1.1:c.1947C>T | |||||
CE36716:p.Ile649= | ||||||
HGVSg | CHROMOSOME_III:g.10045752G>A | |||||
Sequence_details | SMap | S_parent | Sequence | T16G12 | ||
Flanking_sequences | CTTGATTAATTTCAGAATTCGATCAAAACC | ATGTCGTCGTAGATGATTCTGAAGTGGTCA | ||||
Mapping_target | T16G12 | |||||
Type_of_mutation | Substitution | g | a | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023139 | From_analysis | WGS_Andersen | |||
Million_mutation_project_reanalysis | ||||||
WBStrain00023665 | From_analysis | WGS_Andersen | ||||
Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | WGS_Andersen | ||||
Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | WGS_Andersen | ||||
Million_mutation_project_reanalysis | ||||||
WBStrain00027661 | From_analysis | WGS_Andersen | ||||
WBStrain00027662 | From_analysis | WGS_Andersen | ||||
Million_mutation_project_reanalysis | ||||||
WBStrain00027669 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193334193 | ||
dbSNP_ss | ss | 295510112 | ||||
Status | Live | |||||
Affects | Gene | WBGene00011803 | ||||
Transcript | T16G12.1.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | T16G12.1.1:c.1947C>T | |||||
HGVSp | CE36716:p.Ile649= | |||||
cDNA_position | 2061 | |||||
CDS_position | 1947 | |||||
Protein_position | 649 | |||||
Exon_number | 13/32 | |||||
Codon_change | atC/atT | |||||
Amino_acid_change | I | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |