WormBase Tree Display for Variation: WBVar01447216
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WBVar01447216 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01447216 | ||||
Other_name | K02D10.1c.2:c.*332+11T>A | |||||
K02D10.1b.1:c.241+11T>A | ||||||
K02D10.1c.3:c.*332+11T>A | ||||||
K02D10.1c.1:c.*221+11T>A | ||||||
K02D10.1a.1:c.952+11T>A | ||||||
HGVSg | CHROMOSOME_III:g.8774495T>A | |||||
Sequence_details | SMap | S_parent | Sequence | K02D10 | ||
Flanking_sequences | GCTCATGTACGAGTTCATGAGTAAGTTTTT | AAAAAATTGAGAATTTAAATTATAGAAAAT | ||||
Mapping_target | K02D10 | |||||
Type_of_mutation | Substitution | t | a | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (45) | ||||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193333760 | ||
dbSNP_ss | ss | 295509679 | ||||
Status | Live | |||||
Affects | Gene | WBGene00019301 | ||||
WBGene00305497 | ||||||
Transcript | K02D10.9 | |||||
K02D10.1c.3 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | K02D10.1c.3:c.*332+11T>A | |||||
Intron_number | 4/4 | |||||
K02D10.1b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | K02D10.1b.1:c.241+11T>A | |||||
Intron_number | 3/5 | |||||
K02D10.1c.2 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | K02D10.1c.2:c.*332+11T>A | |||||
Intron_number | 4/5 | |||||
K02D10.1c.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | K02D10.1c.1:c.*221+11T>A | |||||
Intron_number | 5/6 | |||||
K02D10.1a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | K02D10.1a.1:c.952+11T>A | |||||
Intron_number | 2/4 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |