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WormBase Tree Display for Variation: WBVar01444702

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Name Class

WBVar01444702EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar01444702
Other_namecewivar00343734
Y55D5A.1b.3:c.43-161T>A
Y55D5A.1b.1:c.43-161T>A
Y55D5A.1b.4:c.43-161T>A
Y55D5A.1a.1:c.412-161T>A
Y55D5A.1b.2:c.43-161T>A
HGVSgCHROMOSOME_III:g.2986903T>A
Sequence_detailsSMapS_parentSequenceY55D5A
Flanking_sequencesATTGAAACGGTCAACTGTAACTCATTTAACTCAGGAAGCTACAGTAACCCAGGTTTTCGT
Mapping_targetY55D5A
Type_of_mutationSubstitutionta
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00005835From_analysisWGS_Andersen
WBStrain00006631From_analysisMillion_mutation_project_reanalysis
WGS_Andersen
WBStrain00006635From_analysisWGS_Andersen
WBStrain00006636From_analysisWGS_Andersen
WBStrain00006637From_analysisMillion_mutation_project_reanalysis
WGS_Andersen
WBStrain00023018From_analysisMillion_mutation_project_reanalysis
WGS_Andersen
LaboratoryQX
PersonWBPerson1730
AnalysisMillion_mutation_project_reanalysis
WGS_Andersen
DB_infoDatabasedbSNP_rsrs193331863
dbSNP_ssss295507782
StatusLive
AffectsGeneWBGene00021915
TranscriptY55D5A.1b.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.1b.3:c.43-161T>A
Intron_number3/5
Y55D5A.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.1b.1:c.43-161T>A
Intron_number5/7
Y55D5A.1b.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.1b.4:c.43-161T>A
Intron_number2/3
Y55D5A.1b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.1b.2:c.43-161T>A
Intron_number4/6
Y55D5A.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.1a.1:c.412-161T>A
Intron_number5/7
ReferenceWBPaper00040707
MethodWGS_Andersen