WormBase Tree Display for Variation: WBVar01444333

WBVar01444333 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar01444333
    Other_name: cewivar00539251
      H14E04.2b.1:c.1507-3C>T
      H14E04.2d.1:c.1132-3C>T
      H14E04.2a.1:c.1498-3C>T
      H14E04.2c.1:c.1519-3C>T
    HGVSg: CHROMOSOME_III:g.2383835C>T
  Sequence_details: SMap: S_parent: Sequence: H14E04
    Flanking_sequences: TTCTACAAATTCCAATTTTTCACATATTTC AGGTCCGTGAAACATTTGCCGAATCGTTCG
    Mapping_target: H14E04
    Type_of_mutation: Substitution: c t
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00022886 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00022888 From_analysis: WGS_Andersen
      WBStrain00022889 From_analysis: WGS_Andersen
      WBStrain00022894 From_analysis: WGS_Andersen
      WBStrain00023085 From_analysis: WGS_Andersen
    Laboratory: QX
    Person: WBPerson1730
    Analysis: Million_mutation_project_reanalysis
      WGS_Andersen
    DB_info: Database: dbSNP_rs rs 193331494
        dbSNP_ss ss 295507413
    Status: Live
  Affects: Gene: WBGene00019199
    Transcript: H14E04.2a.1 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: H14E04.2a.1:c.1498-3C>T
        Intron_number: 9/11
      H14E04.2c.1 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: H14E04.2c.1:c.1519-3C>T
        Intron_number: 10/12
      H14E04.2b.1 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: H14E04.2b.1:c.1507-3C>T
        Intron_number: 9/11
      H14E04.2d.1 VEP_consequence: splice_region_variant,intron_variant
        VEP_impact: LOW
        HGVSc: H14E04.2d.1:c.1132-3C>T
        Intron_number: 6/8
  Reference: WBPaper00040707
  Method: WGS_Andersen