WormBase Tree Display for Variation: WBVar01443412
expand all nodes | collapse all nodes | view schema
WBVar01443412 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01443412 | ||||
Other_name | cewivar00019275 | |||||
R06B10.4b.1:c.2450+8C>T | ||||||
R06B10.4a.1:c.2263-932C>T | ||||||
HGVSg | CHROMOSOME_III:g.1000664C>T | |||||
Sequence_details | SMap | S_parent | Sequence | R06B10 | ||
Flanking_sequences | TCGATTCAGTCAAACGGGCGGCTGTGGGTT | TAATTTTTGTTTAAACTTTAAAATTTTGCT | ||||
Mapping_target | R06B10 | |||||
Type_of_mutation | Substitution | c | t | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (86) | ||||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | ||||||
DB_info | Database | dbSNP_rs | rs | 193330573 | ||
dbSNP_ss | ss | 295506492 | ||||
Status | Live | |||||
Affects | Gene | WBGene00006615 | ||||
Transcript | R06B10.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | R06B10.4a.1:c.2263-932C>T | |||||
Intron_number | 16/18 | |||||
R06B10.4b.1 | VEP_consequence | splice_region_variant,intron_variant | ||||
VEP_impact | LOW | |||||
HGVSc | R06B10.4b.1:c.2450+8C>T | |||||
Intron_number | 18/19 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |