WormBase Tree Display for Variation: WBVar01443340
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WBVar01443340 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar01443340 | |||
Other_name | cewivar00469632 | ||||
T24C4.8.1:c.-1578A>G | |||||
T24C4.4.1:c.373-20T>C | |||||
HGVSg | CHROMOSOME_III:g.872781A>G | ||||
Sequence_details | SMap | S_parent | Sequence | T24C4 | |
Flanking_sequences | GAATATCCAAGCTGAAAAGTTAAGCATATT | ATAGGTTCACATGAGATAAATTGAATTTCA | |||
Mapping_target | T24C4 | ||||
Type_of_mutation | Substitution | a | g | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Andersen | |||||
Laboratory | QX | ||||
Person | WBPerson1730 | ||||
Analysis | WGS_Andersen | ||||
Million_mutation_project_reanalysis | |||||
DB_info | Database (2) | ||||
Status | Live | ||||
Affects | Gene | WBGene00044681 | |||
WBGene00020760 | |||||
Transcript | T24C4.8.1 | VEP_consequence | 5_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T24C4.8.1:c.-1578A>G | ||||
cDNA_position | 199 | ||||
Exon_number | 1/6 | ||||
T24C4.4.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T24C4.4.1:c.373-20T>C | ||||
Intron_number | 4/5 | ||||
Reference | WBPaper00040707 | ||||
Method | WGS_Andersen |