WormBase Tree Display for Variation: WBVar01442603
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WBVar01442603 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01442603 | ||||
Other_name | R05H10.3b.1:c.112+1242A>C | |||||
R05H10.3a.1:c.373+198A>C | ||||||
HGVSg | CHROMOSOME_II:g.14871302A>C | |||||
Sequence_details | SMap | S_parent | Sequence | Y53F4A | ||
Flanking_sequences | ATTATATCAACATTATTGATTTTTTTTTGC | CAAAAAAAATATATCCGAAAATATTAATAA | ||||
Mapping_target | Y53F4A | |||||
Type_of_mutation | Substitution | a | c | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (21) | ||||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193329819 | ||
dbSNP_ss | ss | 295505738 | ||||
Status | Live | |||||
Affects | Gene | WBGene00305794 | ||||
WBGene00011044 | ||||||
Transcript | Y53F4A.6 | |||||
R05H10.3a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | R05H10.3a.1:c.373+198A>C | |||||
Intron_number | 4/9 | |||||
R05H10.3b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | R05H10.3b.1:c.112+1242A>C | |||||
Intron_number | 2/7 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |