WormBase Tree Display for Variation: WBVar01436078
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WBVar01436078 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01436078 | ||||
Other_name | cewivar00414694 | |||||
CE44962:p.Val546= | ||||||
T07H3.1.1:c.1638C>T | ||||||
HGVSg | CHROMOSOME_II:g.1603710C>T | |||||
Sequence_details | SMap | S_parent | Sequence | T07H3 | ||
Flanking_sequences | TGACTACATGGTCGATGGAAGGTTGACCGT | GAGGCTCACGTCAATATCACCAGGGTCACT | ||||
Mapping_target | T07H3 | |||||
Type_of_mutation | Substitution | c | t | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (75) | ||||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | ||||||
DB_info | Database | dbSNP_rs | rs | 193324140 | ||
dbSNP_ss | ss | 295500058 | ||||
Status | Live | |||||
Affects | Gene | WBGene00006464 | ||||
Transcript | T07H3.1.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | T07H3.1.1:c.1638C>T | |||||
HGVSp | CE44962:p.Val546= | |||||
cDNA_position | 1659 | |||||
CDS_position | 1638 | |||||
Protein_position | 546 | |||||
Exon_number | 7/10 | |||||
Codon_change | gtC/gtT | |||||
Amino_acid_change | V | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |