WormBase Tree Display for Variation: WBVar01435642
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| WBVar01435642 | Evidence | Paper_evidence | WBPaper00040707 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01435642 | ||||
| Other_name | cewivar00303511 | |||||
| CE13367:p.Ile786= | ||||||
| T07D3.7b.1:c.2358C>T | ||||||
| CE32063:p.Ile805= | ||||||
| T07D3.7a.1:c.2415C>T | ||||||
| HGVSg | CHROMOSOME_II:g.877707C>T | |||||
| Sequence_details | SMap | S_parent | Sequence | T07D3 | ||
| Flanking_sequences | CGACTTCTTCCTCTGCTCCCACGCTGGTAT | CAAGGAACATCCCGACCATCTCACTACCAT | ||||
| Mapping_target | T07D3 | |||||
| Type_of_mutation | Substitution | c | t | |||
| SeqStatus | Sequenced | |||||
| Variation_type | SNP | |||||
| Natural_variant | ||||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00005305 | From_analysis | WGS_Andersen | |||
| WBStrain00005315 | From_analysis | WGS_Andersen | ||||
| WBStrain00005834 | From_analysis | WGS_Andersen | ||||
| WBStrain00006616 | From_analysis | WGS_Andersen | ||||
| WBStrain00006618 | From_analysis | WGS_Andersen | ||||
| WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | ||||
| WGS_Andersen | ||||||
| WBStrain00023065 | From_analysis | WGS_Andersen | ||||
| WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||
| WGS_Andersen | ||||||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||
| WGS_Andersen | ||||||
| WBStrain00027664 | From_analysis | WGS_Andersen | ||||
| Laboratory | QX | |||||
| Person | WBPerson1730 | |||||
| Analysis | Million_mutation_project_reanalysis | |||||
| WGS_Andersen | ||||||
| DB_info | Database | dbSNP_rs | rs | 193323704 | ||
| dbSNP_ss | ss | 295499622 | ||||
| Status | Live | |||||
| Affects | Gene | WBGene00000106 | ||||
| Transcript | T07D3.7b.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | |||||
| HGVSc | T07D3.7b.1:c.2358C>T | |||||
| HGVSp | CE13367:p.Ile786= | |||||
| cDNA_position | 2360 | |||||
| CDS_position | 2358 | |||||
| Protein_position | 786 | |||||
| Exon_number | 6/8 | |||||
| Codon_change | atC/atT | |||||
| Amino_acid_change | I | |||||
| T07D3.7a.1 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | |||||
| HGVSc | T07D3.7a.1:c.2415C>T | |||||
| HGVSp | CE32063:p.Ile805= | |||||
| cDNA_position | 2415 | |||||
| CDS_position | 2415 | |||||
| Protein_position | 805 | |||||
| Exon_number | 6/8 | |||||
| Codon_change | atC/atT | |||||
| Amino_acid_change | I | |||||
| Reference | WBPaper00040707 | |||||
| Method | WGS_Andersen |
