WormBase Tree Display for Variation: WBVar01435285

WBVar01435285 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar01435285
    Other_name: K01A2.8d.1:c.92+476T>C
      K01A2.8c.3:c.-1124T>C
      K01A2.8c.2:c.-56+476T>C
      K01A2.4a.2:c.*96-736A>G
    HGVSg: CHROMOSOME_II:g.311590A>G
  Sequence_details: SMap: S_parent: Sequence: K01A2
    Flanking_sequences: AATCAATAAAGAACAACTAATAATCAAAAG AAAAAAACTCAAGCCGCATCAGGGGGAGTT
    Mapping_target: K01A2
    Type_of_mutation: Substitution: a g
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00006632 From_analysis: WGS_Andersen
      WBStrain00006640 From_analysis: WGS_Andersen
      WBStrain00022958 From_analysis: WGS_Andersen
      WBStrain00022960 From_analysis: WGS_Andersen
      WBStrain00023079 From_analysis: WGS_Andersen
      WBStrain00023138 From_analysis: WGS_Andersen
    Laboratory: QX
    Person: WBPerson1730
    Analysis: WGS_Andersen
    DB_info: Database: dbSNP_rs rs 193323347
        dbSNP_ss ss 295499265
    Status: Live
  Affects: Gene: WBGene00305491
      WBGene00019279
      WBGene00305493
      WBGene00305490
      WBGene00019282
      WBGene00305492
    Transcript: K01A2.19
      K01A2.16
      K01A2.8c.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K01A2.8c.2:c.-56+476T>C
        Intron_number: 1/6
      K01A2.8c.3 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: K01A2.8c.3:c.-1124T>C
        cDNA_position: 586
        Exon_number: 1/7
      K01A2.18
      K01A2.17
      K01A2.8d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K01A2.8d.1:c.92+476T>C
        Intron_number: 1/4
      K01A2.4a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K01A2.4a.2:c.*96-736A>G
        Intron_number: 12/12
  Reference: WBPaper00040707
  Method: WGS_Andersen