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WormBase Tree Display for Variation: WBVar01435239

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Name Class

WBVar01435239EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar01435239
Other_nameY43H11AL.1a.4:c.1083+1009T>A
Y43H11AL.1a.1:c.1083+1009T>A
Y43H11AL.1a.2:c.1083+1009T>A
Y43H11AL.1a.3:c.1083+1009T>A
Y43H11AL.1d.1:c.109-153T>A
Y43H11AL.1c.1:c.1042-153T>A
Y43H11AL.1b.1:c.1084-153T>A
HGVSgCHROMOSOME_II:g.226927A>T
Sequence_detailsSMapS_parentSequenceY43H11AL
Flanking_sequencesTTAAGAGTGTAGAATCAACGTTAAAAATGGTTTTAAAGTTATATATTTTTTCAATTTTTT
Mapping_targetY43H11AL
Type_of_mutationSubstitutionat
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023079From_analysisWGS_Andersen
LaboratoryQX
PersonWBPerson1730
AnalysisWGS_Andersen
DB_infoDatabasedbSNP_rsrs193323301
dbSNP_ssss295499219
StatusLive
AffectsGeneWBGene00021545
TranscriptY43H11AL.1a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY43H11AL.1a.3:c.1083+1009T>A
Intron_number7/10
Y43H11AL.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY43H11AL.1c.1:c.1042-153T>A
Intron_number5/8
Y43H11AL.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY43H11AL.1d.1:c.109-153T>A
Intron_number1/4
Y43H11AL.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY43H11AL.1b.1:c.1084-153T>A
Intron_number7/11
Y43H11AL.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY43H11AL.1a.1:c.1083+1009T>A
Intron_number7/10
Y43H11AL.1a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY43H11AL.1a.2:c.1083+1009T>A
Intron_number7/8
Y43H11AL.1a.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY43H11AL.1a.4:c.1083+1009T>A
Intron_number7/9
ReferenceWBPaper00040707
MethodWGS_Andersen