WormBase Tree Display for Variation: WBVar01435237
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WBVar01435237 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01435237 | ||||
Other_name | Y43H11AL.1d.1:c.270-1073A>C | |||||
Y43H11AL.1b.1:c.1245-1073A>C | ||||||
Y43H11AL.1c.1:c.1203-1073A>C | ||||||
Y43H11AL.1a.2:c.1084-1073A>C | ||||||
Y43H11AL.1a.1:c.1084-1073A>C | ||||||
Y43H11AL.1a.4:c.1084-1073A>C | ||||||
Y43H11AL.1a.3:c.1084-1073A>C | ||||||
HGVSg | CHROMOSOME_II:g.224870T>G | |||||
Sequence_details | SMap | S_parent | Sequence | Y43H11AL | ||
Flanking_sequences | TTGAATAATGTTTATGTTTCAAATTCAAAT | TTTCAGAAAATGAGAATTCTAAAAATTGTG | ||||
Mapping_target | Y43H11AL | |||||
Type_of_mutation | Substitution | t | g | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023079 | From_analysis | WGS_Andersen | |||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193323299 | ||
dbSNP_ss | ss | 295499217 | ||||
Status | Live | |||||
Affects | Gene | WBGene00021545 | ||||
Transcript | Y43H11AL.1a.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | Y43H11AL.1a.3:c.1084-1073A>C | |||||
Intron_number | 7/10 | |||||
Y43H11AL.1c.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y43H11AL.1c.1:c.1203-1073A>C | |||||
Intron_number | 6/8 | |||||
Y43H11AL.1d.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y43H11AL.1d.1:c.270-1073A>C | |||||
Intron_number | 2/4 | |||||
Y43H11AL.1b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y43H11AL.1b.1:c.1245-1073A>C | |||||
Intron_number | 8/11 | |||||
Y43H11AL.1a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y43H11AL.1a.1:c.1084-1073A>C | |||||
Intron_number | 7/10 | |||||
Y43H11AL.1a.2 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y43H11AL.1a.2:c.1084-1073A>C | |||||
Intron_number | 7/8 | |||||
Y43H11AL.1a.4 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y43H11AL.1a.4:c.1084-1073A>C | |||||
Intron_number | 7/9 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |