WormBase Tree Display for Variation: WBVar01430649
expand all nodes | collapse all nodes | view schema
WBVar01430649 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01430649 | ||||
Other_name | cewivar00071824 | |||||
Y74C10AR.1b.1:c.164-18T>C | ||||||
Y74C10AR.1a.1:c.926-18T>C | ||||||
HGVSg | CHROMOSOME_I:g.2489423T>C | |||||
Sequence_details | SMap | S_parent | Sequence | Y23H5B | ||
Flanking_sequences | TTGAGGATTTTTCATATAAAAATTCAAAAA | TATTGATTTTTTTCCAGGTTACATCAGAAT | ||||
Mapping_target | Y23H5B | |||||
Type_of_mutation | Substitution | t | c | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (55) | ||||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | ||||||
DB_info | Database | dbSNP_rs | rs | 193318712 | ||
dbSNP_ss | ss | 295494629 | ||||
Status | Live | |||||
Affects | Gene | WBGene00001232 | ||||
Transcript | Y74C10AR.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | Y74C10AR.1b.1:c.164-18T>C | |||||
Intron_number | 1/1 | |||||
Y74C10AR.1a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y74C10AR.1a.1:c.926-18T>C | |||||
Intron_number | 4/5 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |