WormBase Tree Display for Variation: WBVar01430587
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WBVar01430587 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01430587 | ||||
Other_name | cewivar00071387 | |||||
Y39G10AR.6.1:c.408G>T | ||||||
CE33221:p.Thr136= | ||||||
HGVSg | CHROMOSOME_I:g.2334246G>T | |||||
Sequence_details | SMap | S_parent | Sequence | Y39G10AR | ||
Flanking_sequences | CCGAGAAATTTTCAAAAAACTTTCAAAAAC | GAATTCCACGTGGCAATTGCGGAACCTGTT | ||||
Mapping_target | Y39G10AR | |||||
Type_of_mutation | Substitution | g | t | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (67) | ||||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | ||||||
DB_info | Database | dbSNP_rs | rs | 193318650 | ||
dbSNP_ss | ss | 295494567 | ||||
Status | Live | |||||
Affects | Gene | WBGene00021464 | ||||
Transcript | Y39G10AR.6.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | Y39G10AR.6.1:c.408G>T | |||||
HGVSp | CE33221:p.Thr136= | |||||
cDNA_position | 412 | |||||
CDS_position | 408 | |||||
Protein_position | 136 | |||||
Exon_number | 5/10 | |||||
Codon_change | acG/acT | |||||
Amino_acid_change | T | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |