WormBase Tree Display for Variation: WBVar01429738
expand all nodes | collapse all nodes | view schema
WBVar01429738 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01429738 | ||||
Other_name | cewivar00370825 | |||||
Y48G1BM.8:n.687+2C>T | ||||||
HGVSg | CHROMOSOME_I:g.248956G>A | |||||
Sequence_details | SMap | S_parent | Sequence | Y48G1BM | ||
Flanking_sequences | ATGACTGGAAAAATAATTACAAGTCAACTT | CTGTCCGAAATTCATCATTACAAATGGAGC | ||||
Mapping_target | Y48G1BM | |||||
Type_of_mutation | Substitution | g | a | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00006632 | From_analysis | WGS_Andersen | |||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | ||||
WGS_Andersen | ||||||
WBStrain00023071 | From_analysis | WGS_Andersen | ||||
WBStrain00023105 | From_analysis | WGS_Andersen | ||||
WBStrain00023106 | From_analysis | WGS_Andersen | ||||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||
WGS_Andersen | ||||||
WBStrain00027653 | From_analysis | WGS_Andersen | ||||
WBStrain00027656 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | ||||||
DB_info | Database | dbSNP_rs | rs | 193317801 | ||
dbSNP_ss | ss | 295493718 | ||||
Status | Live | |||||
Affects | Gene | WBGene00021673 | ||||
Pseudogene | Y48G1BM.8 | VEP_consequence | splice_donor_variant,non_coding_transcript_variant | |||
VEP_impact | HIGH | |||||
HGVSc | Y48G1BM.8:n.687+2C>T | |||||
Intron_number | 5/6 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |