WormBase Tree Display for Variation: WBVar01429562

WBVar01429562 Name: Public_name: tm5861
    HGVSg: CHROMOSOME_III:g.7222720_7223218del
  Sequence_details: SMap: S_parent: Sequence: R151
    Flanking_sequences: tcttattatatccaaaacaagtaaaaactc gaaaaaatcgagaataaaaatcaacgaatg
    Mapping_target: R151
    Source_location: 7 CHROMOSOME_III 7222719 7223219 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm5861_external
      tm5861_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 5861
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00020109
    Transcript: R151.6.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 1-2/4
        Exon_number: 1-2/5
  Isolation: Mutagen: TMP/UV
  Genetics: Map: III
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 25251/25252-25750/25751 (499 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele