WormBase Tree Display for Variation: WBVar01418438
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| WBVar01418438 | Evidence | Paper_evidence | WBPaper00037807 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01418438 | |||||
| Other_name | cewivar00384012 | ||||||
| Y71G12B.11b.1:c.*201C>A | |||||||
| Y71G12B.11e.1:c.1813-221C>A | |||||||
| Y71G12B.11c.1:c.919-221C>A | |||||||
| Y71G12B.11a.1:c.2908-221C>A | |||||||
| HGVSg | CHROMOSOME_I:g.1733076C>A | ||||||
| Sequence_details | SMap | S_parent | Sequence | Y71G12B | |||
| Flanking_sequences | TCATCGACTAAAAGCCTTTTCACTGAGTTTTGACCCCCCAACCAGAACCC | TAGTGGATACCGTAAGTGGTTGATGAGAGTGTGCTGTGAACCGGTCTGTG | |||||
| Mapping_target | Y71G12B | ||||||
| Type_of_mutation | Substitution | c | A | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | SNP | ||||||
| Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00006642 | From_analysis | WGS_De_Bono | ||||
| WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||||
| Laboratory | AX | ||||||
| Analysis | WGS_De_Bono | ||||||
| Million_mutation_project_reanalysis | |||||||
| DB_info | Database | dbSNP_ss | ss | 539126046 | |||
| Status | Live | ||||||
| Affects | Gene | WBGene00006771 | |||||
| Transcript | Y71G12B.11c.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | Y71G12B.11c.1:c.919-221C>A | ||||||
| Intron_number | 3/6 | ||||||
| Y71G12B.11e.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | Y71G12B.11e.1:c.1813-221C>A | ||||||
| Intron_number | 3/6 | ||||||
| Y71G12B.11a.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | Y71G12B.11a.1:c.2908-221C>A | ||||||
| Intron_number | 7/11 | ||||||
| Y71G12B.11b.1 | VEP_consequence | 3_prime_UTR_variant | |||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | Y71G12B.11b.1:c.*201C>A | ||||||
| cDNA_position | 3199 | ||||||
| Exon_number | 9/13 | ||||||
| Reference | WBPaper00037807 | ||||||
| Method | WGS_De_Bono |
