WormBase Tree Display for Variation: WBVar01413943
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WBVar01413943 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01413943 | ||||
Other_name | C05D12.3c.1:c.*65+504_*65+505insAAGAG | |||||
C05D12.3c.3:c.*65+504_*65+505insAAGAG | ||||||
C05D12.3c.2:c.*569_*570insAAGAG | ||||||
HGVSg | CHROMOSOME_II:g.11431122_11431123insAAGAG | |||||
Sequence_details | SMap | S_parent | Sequence | C05D12 | ||
Flanking_sequences | AGGTGAGAGGAATGGCTCCATCTTGAGAATGTTTTCCAAAGAGTATAACA | TTTCTTGATCTCCAATTTTTCTCTACAAGACATCTGCATCATTCTCATTC | ||||
Mapping_target | C05D12 | |||||
Type_of_mutation | Insertion | AAGAG | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00022850 | From_analysis | WGS_De_Bono | |||
Laboratory | AX | |||||
Analysis | WGS_De_Bono | |||||
DB_info | Database | dbSNP_ss | ss | 539199858 | ||
Status | Live | |||||
Affects | Gene | WBGene00014666 | ||||
Transcript | C05D12.3c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | C05D12.3c.1:c.*65+504_*65+505insAAGAG | |||||
Intron_number | 17/17 | |||||
C05D12.3c.3 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | C05D12.3c.3:c.*65+504_*65+505insAAGAG | |||||
Intron_number | 16/17 | |||||
C05D12.3c.2 | VEP_consequence | 3_prime_UTR_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | C05D12.3c.2:c.*569_*570insAAGAG | |||||
cDNA_position | 3589-3590 | |||||
Exon_number | 17/17 | |||||
Reference | WBPaper00037807 | |||||
Method | WGS_De_Bono |