WormBase Tree Display for Variation: WBVar01402371
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| WBVar01402371 | Evidence | Paper_evidence | WBPaper00037807 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01402371 | ||||
| Other_name | cewivar00713049 | |||||
| W08A12.1b.2:c.195+185del | ||||||
| W08A12.1e.1:c.120+185del | ||||||
| W08A12.1d.1:c.318+185del | ||||||
| W08A12.1b.3:c.195+185del | ||||||
| W08A12.1c.1:c.177+185del | ||||||
| W08A12.1b.1:c.195+185del | ||||||
| W08A12.1a.1:c.366+185del | ||||||
| HGVSg | CHROMOSOME_V:g.3697690del | |||||
| Sequence_details | SMap | S_parent | Sequence | W08A12 | ||
| Flanking_sequences | TTTTAAAATTTTCGAGAAAAAAATTTATATCATGTTTTTGAGAGAAAATC | AAAAAAAAAATGAAAAACGAAAATTTTTGATTCAAAAAGATTTTTTTAAT | ||||
| Mapping_target | W08A12 | |||||
| Type_of_mutation | Deletion | A | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | |||||
| Variation_type | SNP | |||||
| Natural_variant | ||||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00026322 | From_analysis | WGS_De_Bono | ||||
| Laboratory | AX | |||||
| Analysis | WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | ||||||
| DB_info | Database | dbSNP_ss | ss | 539136948 | ||
| Status | Live | |||||
| Affects | Gene | WBGene00021078 | ||||
| Transcript | W08A12.1b.3 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | |||||
| HGVSc | W08A12.1b.3:c.195+185del | |||||
| Intron_number | 4/7 | |||||
| W08A12.1a.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | W08A12.1a.1:c.366+185del | |||||
| Intron_number | 4/7 | |||||
| W08A12.1c.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | W08A12.1c.1:c.177+185del | |||||
| Intron_number | 4/7 | |||||
| W08A12.1b.2 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | W08A12.1b.2:c.195+185del | |||||
| Intron_number | 5/8 | |||||
| W08A12.1b.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | W08A12.1b.1:c.195+185del | |||||
| Intron_number | 5/8 | |||||
| W08A12.1d.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | W08A12.1d.1:c.318+185del | |||||
| Intron_number | 2/5 | |||||
| W08A12.1e.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | W08A12.1e.1:c.120+185del | |||||
| Intron_number | 2/4 | |||||
| Reference | WBPaper00037807 | |||||
| Method | WGS_De_Bono |
