WormBase Tree Display for Variation: WBVar01402017
expand all nodes | collapse all nodes | view schema
| WBVar01402017 | Evidence | Paper_evidence | WBPaper00037807 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01402017 | ||||
| Other_name | cewivar00637735 | |||||
| Y56A3A.2.1:c.230-863_230-862del | ||||||
| HGVSg | CHROMOSOME_III:g.11858212_11858213del | |||||
| Sequence_details | SMap | S_parent | Sequence | Y56A3A | ||
| Flanking_sequences | AAAAAGTTGCAGTGCATTTCGCTTTGTTCTACAAAAAATGCGGGATTTTT | CCCCCCCAAAAAACTGTGTTTAATGTCATTTTTCATAAAAATCTGAAAAT | ||||
| Mapping_target | Y56A3A | |||||
| Type_of_mutation | Deletion | CC | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | |||||
| Variation_type | SNP | |||||
| Natural_variant | ||||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||
| WGS_De_Bono | ||||||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||
| Laboratory | AX | |||||
| Analysis | WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | ||||||
| DB_info | Database | dbSNP_ss | ss | 539196838 | ||
| Status | Live | |||||
| Affects | Gene | WBGene00013225 | ||||
| Transcript | Y56A3A.2.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | |||||
| HGVSc | Y56A3A.2.1:c.230-863_230-862del | |||||
| Intron_number | 3/9 | |||||
| Reference | WBPaper00037807 | |||||
| Method | WGS_De_Bono |
