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WormBase Tree Display for Variation: WBVar01401360

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Name Class

WBVar01401360EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar01401360
Other_namecewivar00770323
H14E04.2d.1:c.1131+28_1131+29del
H14E04.2a.1:c.1497+28_1497+29del
H14E04.2c.1:c.1518+28_1518+29del
H14E04.2b.1:c.1506+28_1506+29del
HGVSgCHROMOSOME_III:g.2382835_2382836del
Sequence_detailsSMapS_parentSequenceH14E04
Flanking_sequencesGCGAAGAGGATAGTTTGGCTAAGGTTTCTGGAGAAACACGAAGAAAATTTAAAAAAAAAACGGAGAAATTTGAGCCAAAAATCGAGAAAAAAATTTTTCA
Mapping_targetH14E04
Type_of_mutationDeletionAAPaper_evidenceWBPaper00037807
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022850From_analysisMillion_mutation_project_reanalysis
WGS_De_Bono
LaboratoryAX
AnalysisWGS_De_Bono
Million_mutation_project_reanalysis
DB_infoDatabasedbSNP_ssss539196247
StatusLive
AffectsGeneWBGene00019199
TranscriptH14E04.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH14E04.2a.1:c.1497+28_1497+29del
Intron_number9/11
H14E04.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH14E04.2c.1:c.1518+28_1518+29del
Intron_number10/12
H14E04.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH14E04.2b.1:c.1506+28_1506+29del
Intron_number9/11
H14E04.2d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH14E04.2d.1:c.1131+28_1131+29del
Intron_number6/8
ReferenceWBPaper00037807
MethodWGS_De_Bono